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Rgn regucalcin [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101955377, updated on 8-Mar-2024

Summary

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Gene symbol
Rgn
Gene description
regucalcin
Locus tag
H1C71_030206
See related
EnsemblRapid:ENSSTOG00015002301
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) X NC_053502.1 (33032122..33050817)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936502.1 (12872938..12891270)

Chromosome X - NC_053502.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene RP2 activator of ARL3 GTPase Neighboring gene jade family PHD finger 3 Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene NADH:ubiquinone oxidoreductase subunit B11 Neighboring gene RNA binding motif protein 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regucalcin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NC_053502.1 Reference HiC_Itri_2 Primary Assembly

    Range
    33032122..33050817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005324006.4 → XP_005324063.1  regucalcin

    See identical proteins and their annotated locations for XP_005324063.1

    UniProtKB/TrEMBL
    I3MMS4
    Conserved Domains (1) summary
    pfam08450
    Location:16 → 264
    SGL; SMP-30/Gluconolaconase/LRE-like region

  2. XM_040277452.1 → XP_040133386.1  regucalcin

    UniProtKB/TrEMBL
    I3MMS4
    Related
    ENSSTOP00015002824.1, ENSSTOT00015003123.1
    Conserved Domains (1) summary
    pfam08450
    Location:16 → 264
    SGL; SMP-30/Gluconolaconase/LRE-like region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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