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Gpsm2 G protein signaling modulator 2 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101836545, updated on 8-Mar-2024

Summary

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Gene symbol
Gpsm2
Gene description
G protein signaling modulator 2
See related
EnsemblRapid:ENSMAUG00000015905
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429193.1 (48013012..48054494)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801668.1 (9280229..9321625, complement)

NW_024429193.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121142354 Neighboring gene syntaxin binding protein 3 Neighboring gene AKNA domain containing 1 Neighboring gene chloride channel CLIC like 1 Neighboring gene WD repeat domain 47 Neighboring gene 60S ribosomal protein L9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein-signaling modulator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429193.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    48013012..48054494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013118115.3 → XP_012973569.2  G-protein-signaling modulator 2 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CD98
    Related
    ENSMAUP00000029155.1, ENSMAUT00000051545.1
    Conserved Domains (4) summary
    smart00390
    Location:567 → 589
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    COG0457
    Location:143 → 397
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:321 → 348
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:364 → 432
    TPR_12; Tetratricopeptide repeat

  2. XM_005076652.4 → XP_005076709.2  G-protein-signaling modulator 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7QXB2
    Related
    ENSMAUP00000016889.2, ENSMAUT00000020833.2
    Conserved Domains (4) summary
    smart00390
    Location:489 → 511
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    COG0457
    Location:65 → 319
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:243 → 270
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:243 → 314
    TPR_12; Tetratricopeptide repeat

  3. XM_040752033.1 → XP_040607967.1  G-protein-signaling modulator 2 isoform X3

    UniProtKB/TrEMBL
    A0A1U7QXB2
    Conserved Domains (4) summary
    smart00390
    Location:483 → 505
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    COG0457
    Location:21 → 280
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:237 → 264
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:237 → 308
    TPR_12; Tetratricopeptide repeat

  4. XM_040752032.1 → XP_040607966.1  G-protein-signaling modulator 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7QXB2
    Conserved Domains (4) summary
    smart00390
    Location:489 → 511
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    COG0457
    Location:65 → 319
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:243 → 270
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:243 → 314
    TPR_12; Tetratricopeptide repeat

  5. XM_040752034.1 → XP_040607968.1  G-protein-signaling modulator 2 isoform X4

    UniProtKB/TrEMBL
    A0A1U7QXB2
    Conserved Domains (4) summary
    smart00390
    Location:470 → 492
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    COG0457
    Location:8 → 267
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:224 → 251
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:224 → 295
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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