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WSB1 WD repeat and SOCS box containing 1 [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101818138, updated on 3-Aug-2024

Summary

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Gene symbol
WSB1
Gene description
WD repeat and SOCS box containing 1
See related
Ensembl:ENSFALG00000004939
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 19 NC_021690.1 (11113891..11124051)

Chromosome 19 - NC_021690.1Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 Neighboring gene ecotropic viral integration site 2B Neighboring gene oligodendrocyte myelin glycoprotein Neighboring gene kinase suppressor of ras 1 Neighboring gene nitric oxide synthase 2 Neighboring gene LYR motif containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021690.1 Chromosome 19 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat and SOCS box-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021690.1 Reference FicAlb1.5 Primary Assembly

    Range
    11113891..11124051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005056582.2 → XP_005056639.1  WD repeat and SOCS box-containing protein 1

    UniProtKB/TrEMBL
    U3JQU4
    Related
    ENSFALP00000005148.1, ENSFALT00000005173.2
    Conserved Domains (4) summary
    COG2319
    Location:140 → 383
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:143 → 389
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cd03746
    Location:383 → 422
    SOCS_WSB1_SWIP1; SOCS (suppressors of cytokine signaling) box of WSB1/SWiP1-like proteins. This subfamily contains WSB-1 (SOCS-box-containing WD-40 protein), part of an E3 ubiquitin ligase for the thyroid-hormone-activating type 2 iodothyronine deiodinase (D2) and SWiP-1 ...
    sd00039
    Location:175 → 213
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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