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LOC101783444 BSD domain-containing protein 1 [ Setaria italica (foxtail millet) ]

Gene ID: 101783444, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101783444
Gene description
BSD domain-containing protein 1
Locus tag
SETIT_029824mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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Location:
chromosome: II
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) II NC_028451.1 (47092228..47094061)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675962.1 (47092998..47094785)

Chromosome II - NC_028451.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 734A5 Neighboring gene 39S ribosomal protein L45, mitochondrial Neighboring gene uncharacterized LOC101784260 Neighboring gene E3 ubiquitin-protein ligase SP1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BSD domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028451.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    47092228..47094061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004958468.4 → XP_004958525.1  BSD domain-containing protein 1

    UniProtKB/TrEMBL
    K3ZT94
    Conserved Domains (1) summary
    pfam03909
    Location:170 → 226
    BSD; BSD domain
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases