U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101753659 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [ Setaria italica (foxtail millet) ]

Gene ID: 101753659, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101753659
Gene description
pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha
Locus tag
SETIT_006294mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: IV
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) IV NC_028453.1 (16466847..16477732)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675964.1 (16467025..16477911)

Chromosome IV - NC_028453.1Genomic Context describing neighboring genes Neighboring gene AT-hook motif nuclear-localized protein 10 Neighboring gene putative nuclease HARBI1 Neighboring gene uncharacterized protein At2g39795, mitochondrial Neighboring gene diacylglycerol O-acyltransferase 2D

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in photosynthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to glucose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028453.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    16466847..16477732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004965296.3 → XP_004965353.1  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

    UniProtKB/TrEMBL
    A0A368QUA6
    Conserved Domains (1) summary
    PLN03028
    Location:13 → 622
    PLN03028; pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases