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Zhx3 zinc fingers and homeoboxes 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101705800, updated on 8-Mar-2024

Summary

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Gene symbol
Zhx3
Gene description
zinc fingers and homeoboxes 3
Locus tag
GW7_18073
See related
Ensembl:ENSHGLG00000004774
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Zhx3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624919.1 (1802708..1972676, complement)

NW_004624919.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase I Neighboring gene BRCA1-A complex subunit Abraxas-like Neighboring gene phospholipase C gamma 1 Neighboring gene histone acetyltransferase KAT2B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624919 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc fingers and homeoboxes protein 3
Names
Zinc fingers and homeoboxes protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624919.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1802708..1972676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004874036.3 → XP_004874093.2  zinc fingers and homeoboxes protein 3

    See identical proteins and their annotated locations for XP_004874093.2

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  2. XM_021251575.1 → XP_021107234.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Related
    ENSHGLP00000006527.1, ENSHGLT00000006609.1
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  3. XM_021251573.1 → XP_021107232.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  4. XM_004874037.3 → XP_004874094.1  zinc fingers and homeoboxes protein 3

    See identical proteins and their annotated locations for XP_004874094.1

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  5. XM_013068983.2 → XP_012924437.1  zinc fingers and homeoboxes protein 3

    See identical proteins and their annotated locations for XP_012924437.1

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  6. XM_021251574.1 → XP_021107233.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  7. XM_021251579.1 → XP_021107238.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  8. XM_021251576.1 → XP_021107235.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  9. XM_021251577.1 → XP_021107236.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez

  10. XM_021251578.1 → XP_021107237.1  zinc fingers and homeoboxes protein 3

    UniProtKB/TrEMBL
    A0A0P6K4H8, G5C9N2
    Related
    ENSHGLP00000006528.1, ENSHGLT00000006610.1
    Conserved Domains (3) summary
    smart00389
    Location:621 → 666
    HOX; Homeodomain
    cd00086
    Location:500 → 553
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:850 → 892
    Homez; Homeodomain leucine-zipper encoding, Homez
Nucleotide Protein
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