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faf2 Fas associated factor family member 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101480335, updated on 8-Mar-2024

Summary

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Gene symbol
faf2
Gene description
Fas associated factor family member 2
See related
Ensembl:ENSMZEG00005009052
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
11
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG2 NC_036781.1 (19364811..19371480)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531715.1 (3302038..3308716, complement)

Linkage Group LG2 - NC_036781.1Genomic Context describing neighboring genes Neighboring gene NIMA-related kinase 12 Neighboring gene protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) Neighboring gene ring finger protein 44 Neighboring gene cadherin related family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAS-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036781.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    19364811..19371480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004541088.5 → XP_004541145.1  FAS-associated factor 2

    See identical proteins and their annotated locations for XP_004541145.1

    UniProtKB/TrEMBL
    A0A3P9BR41
    Related
    ENSMZEP00005012096.1, ENSMZET00005012523.1
    Conserved Domains (3) summary
    cd02991
    Location:154 → 269
    UAS_ETEA; UAS family, ETEA subfamily; composed of proteins similar to human ETEA protein, the translation product of a highly expressed gene in the T-cells and eosinophils of atopic dermatitis patients compared with those of normal individuals. ETEA shows homology ...
    cd14414
    Location:15 → 52
    UBA_FAF2; UBA-like TAP-C domain found in FAS-associated factor 2 (FAF2) and similar proteins
    cd16120
    Location:362 → 441
    UBX_UBXN3B; Ubiquitin regulatory domain X (UBX) found in FAS associated factor 2 (FAF2, also known as UBXN3B) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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