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gtf3c4 general transcription factor IIIC, polypeptide 4 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101473637, updated on 8-Mar-2024

Summary

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Gene symbol
gtf3c4
Gene description
general transcription factor IIIC, polypeptide 4
See related
Ensembl:ENSMZEG00005015629
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG7
Exon count:
5
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (34046918..34061530, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531711.1 (15035198..15049791)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene growth factor independent 1B transcription repressor Neighboring gene TSC complex subunit 1b Neighboring gene BarH-like homeobox 1b Neighboring gene erythrocyte band 7 integral membrane protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase III promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor 3C polypeptide 4
Names
general transcription factor IIIC subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    34046918..34061530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004538432.4 → XP_004538489.1  general transcription factor 3C polypeptide 4

    UniProtKB/TrEMBL
    A0A3P9CG78
    Related
    ENSMZEP00005020845.1, ENSMZET00005021529.1
    Conserved Domains (2) summary
    pfam12657
    Location:43 → 229
    TFIIIC_delta; Transcription factor IIIC subunit delta N-term
    pfam12660
    Location:692 → 765
    zf-TFIIIC; Putative zinc-finger of transcription factor IIIC complex
Nucleotide Protein
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Gene LinkOut

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