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LOC101471640 carbohydrate sulfotransferase 11 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101471640, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101471640
Gene description
carbohydrate sulfotransferase 11
See related
Ensembl:ENSMZEG00005022014
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC101471640 in Genome Data Viewer
Location:
chromosome: LG20
Exon count:
4
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG20 NC_036799.1 (12381021..12401405, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531875.1 (515900..536357, complement)

Linkage Group LG20 - NC_036799.1Genomic Context describing neighboring genes Neighboring gene Krueppel-like factor 15 Neighboring gene solute carrier family 41 member 1 Neighboring gene neurotensin receptor type 1 Neighboring gene uncharacterized LOC111500738

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036799.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    12381021..12401405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012924354.2 → XP_012779808.1  carbohydrate sulfotransferase 11 isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:100 → 330
    Sulfotransfer_2; Sulfotransferase family

  2. XM_004570015.2 → XP_004570072.1  carbohydrate sulfotransferase 11 isoform X3

    Related
    ENSMZEP00005029508.1, ENSMZET00005030439.1
    Conserved Domains (1) summary
    pfam03567
    Location:100 → 330
    Sulfotransfer_2; Sulfotransferase family

  3. XM_004570014.2 → XP_004570071.1  carbohydrate sulfotransferase 11 isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:101 → 331
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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