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atf6b activating transcription factor 6 beta [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101165322, updated on 18-Aug-2023

Summary

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Gene symbol
atf6b
Gene description
activating transcription factor 6 beta
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Annotation information
not in current annotation release
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Genomic context

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Location:
chromosome: 11
Annotation release Status Assembly Chr Location
102 latest, but not current ASM31367v1 (GCF_000313675.1) 11 NC_019869.1 (1919599..1930071, complement)

Bibliography

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Related articles in PubMed

  1. ATF6α/β-mediated adjustment of ER chaperone levels is essential for development of the notochord in medaka fish. Ishikawa T, et al. Mol Biol Cell, 2013 May. PMID 23447699, Free PMC Article
  2. Vertebrate unfolded protein response: mammalian signaling pathways are conserved in Medaka fish. Ishikawa T, et al. Cell Struct Funct, 2011. PMID 22067999
  3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ATF6a/b-mediated adjustment of chaperone levels to increased demands in the endoplasmic reticulum is essential for development of the notochord in medaka fish.
    Title: ATF6α/β-mediated adjustment of ER chaperone levels is essential for development of the notochord in medaka fish.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-6 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001278804.1 → NP_001265733.1  cyclic AMP-dependent transcription factor ATF-6 beta

    See identical proteins and their annotated locations for NP_001265733.1

    Status: PROVISIONAL

    Source sequence(s)
    AB667980
    UniProtKB/TrEMBL
    A0A3P9JPJ1, A0A3P9KSX7, G5ELX1
    Conserved Domains (1) summary
    cd14700
    Location:300 → 350
    bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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