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si:ch211-288g17.3 basic salivary proline-rich protein 2 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101165202, updated on 8-Mar-2024

Summary

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Gene symbol
si:ch211-288g17.3
Gene description
basic salivary proline-rich protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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See si:ch211-288g17.3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 11 NC_019869.2 (593182..596428, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004090564.1 (758..9035, complement)

Chromosome 11 - NC_019869.2Genomic Context describing neighboring genes Neighboring gene myocyte-specific enhancer factor 2D homolog Neighboring gene transmembrane protein 79a Neighboring gene uncharacterized LOC111948209 Neighboring gene CD209 antigen-like protein E Neighboring gene involucrin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic salivary proline-rich protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019869.2 Reference ASM223467v1 Primary Assembly

    Range
    593182..596428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023960275.1 → XP_023816043.1  basic salivary proline-rich protein 2

    Conserved Domains (1) summary
    cl25574
    Location:50 → 258
    TOP2c; TopoisomeraseII
Nucleotide Protein
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