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tmem30aa transmembrane protein 30Aa [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101158900, updated on 8-Mar-2024

Summary

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Gene symbol
tmem30aa
Gene description
transmembrane protein 30Aa
See related
EnsemblRapid:ENSORLG00000017322
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
tmem30a
Orthologs
zebrafish all
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Genomic context

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See tmem30aa in Genome Data Viewer
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 22 NC_019880.2 (15982835..15989404, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 22 NC_019880.1 (15663764..15668819, complement)

Chromosome 22 - NC_019880.2Genomic Context describing neighboring genes Neighboring gene CD109 antigen-like Neighboring gene collagen, type XII, alpha 1a Neighboring gene filamin-A-interacting protein 1 Neighboring gene transcription factor B1, mitochondrial Neighboring gene claudin 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell cycle control protein 50A
Names
transmembrane protein 30A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019880.2 Reference ASM223467v1 Primary Assembly

    Range
    15982835..15989404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023951805.1 → XP_023807573.1  cell cycle control protein 50A

    UniProtKB/TrEMBL
    A0A3P9I5K7, H2MSC3
    Related
    ENSORLP00000021660.3, ENSORLT00000021661.3
    Conserved Domains (1) summary
    pfam03381
    Location:72 → 358
    CDC50; LEM3 (ligand-effect modulator 3) family / CDC50 family
Nucleotide Protein
Heading Accession and Version

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