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cxcr3.2 chemokine (C-X-C motif) receptor 3, tandem duplicate 2 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101155297, updated on 8-Mar-2024

Summary

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Gene symbol
cxcr3.2
Gene description
chemokine (C-X-C motif) receptor 3, tandem duplicate 2
See related
EnsemblRapid:ENSORLG00000013459
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 16 NC_019874.2 (21463889..21465873)
102 previous assembly ASM31367v1 (GCF_000313675.1) 16 NC_019874.1 (18299440..18301429)

Chromosome 16 - NC_019874.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101161002 Neighboring gene toll-like receptor 21 Neighboring gene C-X-C chemokine receptor type 1 Neighboring gene C-X-C chemokine receptor type 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cxcl9l and Cxcr3.2 regulate recruitment of osteoclast progenitors to bone matrix in a medaka osteoporosis model. Phan QT, et al. Proc Natl Acad Sci U S A, 2020 Aug 11. PMID 32719141, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Cxcl9l and Cxcr3.2 regulate recruitment of osteoclast progenitors to bone matrix in a medaka osteoporosis model.
    Title: Cxcl9l and Cxcr3.2 regulate recruitment of osteoclast progenitors to bone matrix in a medaka osteoporosis model.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-X-C chemokine receptor type 3-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019874.2 Reference ASM223467v1 Primary Assembly

    Range
    21463889..21465873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004078228.4 → XP_004078276.1  C-X-C chemokine receptor type 3-2

    UniProtKB/TrEMBL
    A0A3P9J1Y4, A0A3P9K098, H2ME76
    Related
    ENSORLP00000080017.1, ENSORLT00000055275.1
    Conserved Domains (1) summary
    pfam00001
    Location:71 → 331
    7tm_1; 7 transmembrane receptor (rhodopsin family)
Nucleotide Protein
Heading Accession and Version

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