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SSBP1 single stranded DNA binding protein 1 [ Felis catus (domestic cat) ]

Gene ID: 101083159, updated on 8-Mar-2024

Summary

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Gene symbol
SSBP1
Gene description
single stranded DNA binding protein 1
See related
EnsemblRapid:ENSFCTG00005018612
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: A2
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A2 NC_058369.1 (156059806..156076728)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A2 NC_018724.3 (157854290..157871169)

Chromosome A2 - NC_058369.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 11 Neighboring gene uncharacterized LOC123384057 Neighboring gene WEE2 oocyte meiosis inhibiting kinase Neighboring gene taste 2 receptor member 3 Neighboring gene taste 2 receptor member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and comparative genomic analysis of 1227 Felis catus cDNA sequences enriched for developmental, clinical and nutritional phenotypes. Irizarry KJ, et al. BMC Genomics, 2012 Jan 18. PMID 22257742, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-stranded DNA-binding protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058369.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    156059806..156076728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045052880.1 → XP_044908815.1  single-stranded DNA-binding protein, mitochondrial isoform X3

    Conserved Domains (1) summary
    cl09930
    Location:27 → 137
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  2. XM_045052876.1 → XP_044908811.1  single-stranded DNA-binding protein, mitochondrial isoform X1

    Conserved Domains (1) summary
    cl09930
    Location:27 → 138
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  3. XM_045052893.1 → XP_044908828.1  single-stranded DNA-binding protein, mitochondrial isoform X6

    Related
    ENSFCTP00005039426.1, ENSFCTT00005053626.1
    Conserved Domains (1) summary
    cl09930
    Location:27 → 138
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  4. XM_019825921.3 → XP_019681480.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  5. XM_045052881.1 → XP_044908816.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  6. XM_045052886.1 → XP_044908821.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  7. XM_045052882.1 → XP_044908817.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  8. XM_045052884.1 → XP_044908819.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  9. XM_045052887.1 → XP_044908822.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  10. XM_045052885.1 → XP_044908820.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  11. XM_045052888.1 → XP_044908823.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  12. XM_045052891.1 → XP_044908826.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  13. XM_045052883.1 → XP_044908818.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  14. XM_045052890.1 → XP_044908825.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  15. XM_045052889.1 → XP_044908824.1  single-stranded DNA-binding protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2I2V3I8
    Conserved Domains (1) summary
    cl09930
    Location:27 → 143
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  16. XM_045052879.1 → XP_044908814.1  single-stranded DNA-binding protein, mitochondrial isoform X2

    Related
    ENSFCTP00005039363.1, ENSFCTT00005053549.1
    Conserved Domains (1) summary
    cl09930
    Location:27 → 136
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  17. XM_045052892.1 → XP_044908827.1  single-stranded DNA-binding protein, mitochondrial isoform X5

    Conserved Domains (1) summary
    cl09930
    Location:27 → 141
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  18. XM_045052877.1 → XP_044908812.1  single-stranded DNA-binding protein, mitochondrial isoform X1

    Conserved Domains (1) summary
    cl09930
    Location:27 → 138
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

  19. XM_045052878.1 → XP_044908813.1  single-stranded DNA-binding protein, mitochondrial isoform X1

    Conserved Domains (1) summary
    cl09930
    Location:27 → 138
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
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