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sin3aa SIN3 transcription regulator family member Aa [ Takifugu rubripes (torafugu) ]

Gene ID: 101068239, updated on 8-Mar-2024

Summary

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Gene symbol
sin3aa
Gene description
SIN3 transcription regulator family member Aa
See related
Ensembl:ENSTRUG00000015995
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
sin3a
Orthologs
human zebrafish all
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Genomic context

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See sin3aa in Genome Data Viewer
Location:
chromosome: 9
Exon count:
21
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 9 NC_042293.1 (10771709..10781111, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 9 NC_018898.1 (9573910..9583854, complement)

Chromosome 9 - NC_042293.1Genomic Context describing neighboring genes Neighboring gene SKI8 subunit of superkiller complex Neighboring gene cellular retinoic acid binding protein 1a Neighboring gene protein tyrosine phosphatase non-receptor type 9a Neighboring gene snurportin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired amphipathic helix protein Sin3a
Names
SIN3 transcription regulator family member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042293.1 Reference fTakRub1.2 Primary Assembly

    Range
    10771709..10781111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011607427.2 → XP_011605729.2  paired amphipathic helix protein Sin3a

    UniProtKB/TrEMBL
    H2UVC0
    Related
    ENSTRUP00000040897.3, ENSTRUT00000041039.3
    Conserved Domains (1) summary
    COG5602
    Location:113 → 1248
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

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