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bst1.L bone marrow stromal cell antigen 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 101027297, updated on 11-Apr-2024

Summary

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Official Symbol
bst1.L
Official Full Name
bone marrow stromal cell antigen 1 L homeolog
Primary source
Xenbase:XB-GENE-6488244
Locus tag
XELAEV_18005145mg
See related
EnsemblRapid:ENSXLAG00005001503
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cd157
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Genomic context

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Location:
chromosome: 1L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (29385287..29412658)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (20614225..20641376)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene coiled-coil and C2 domain containing 2A L homeolog Neighboring gene F-box and leucine-rich repeat protein 5 L homeolog Neighboring gene CD38 molecule L homeolog Neighboring gene fibroblast growth factor binding protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a major enzyme for the synthesis and hydrolysis of cyclic ADP-ribose in amphibian cells and evolutional conservation of the enzyme from human to invertebrate. Ikeda T, et al. Mol Cell Biochem, 2012 Jul. PMID 22422046

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. recombinant Xenopus CD157 had no enzymatic activity under physiological conditions
    Title: Identification of a major enzyme for the synthesis and hydrolysis of cyclic ADP-ribose in amphibian cells and evolutional conservation of the enzyme from human to invertebrate.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables NAD+ nucleosidase activity IEA
Inferred from Electronic Annotation
more info
  
enables NAD+ nucleotidase, cyclic ADP-ribose generating IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphorus-oxygen lyase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of B cell proliferation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
bone marrow stromal cell antigen 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001280646.1 → NP_001267575.1  bone marrow stromal cell antigen 1 L homeolog precursor

    See identical proteins and their annotated locations for NP_001267575.1

    Status: PROVISIONAL

    Source sequence(s)
    AB194901
    UniProtKB/TrEMBL
    H7C832
    Related
    ENSXLAP00005004599.1, ENSXLAT00005004665.1
    Conserved Domains (1) summary
    pfam02267
    Location:33 → 262
    Rib_hydrolayse; ADP-ribosyl cyclase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    29385287..29412658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018253364.2 → XP_018108853.1  bone marrow stromal cell antigen 1 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0USS7
    Related
    ENSXLAP00005004597.1, ENSXLAT00005004663.1

  2. XM_018253190.2 → XP_018108679.1  bone marrow stromal cell antigen 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTJ2, A0A974DX43

  3. XM_018253275.2 → XP_018108764.1  bone marrow stromal cell antigen 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HTJ2, A0A974DX43
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
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