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CXCL10 C-X-C motif chemokine ligand 10 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992984, updated on 8-Mar-2024

Summary

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Gene symbol
CXCL10
Gene description
C-X-C motif chemokine ligand 10
See related
Ensembl:ENSPPAG00000038167
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (54049643..54052033)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (54239397..54241786)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene ADP-ribosyltransferase 3 (inactive) Neighboring gene large ribosomal subunit protein eL36-like Neighboring gene C-X-C motif chemokine ligand 11 Neighboring gene C-X-C motif chemokine ligand 9 Neighboring gene SDA1 domain containing 1 Neighboring gene uncharacterized LOC117979974

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-X-C motif chemokine 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    54049643..54052033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003832298.4 → XP_003832346.1  C-X-C motif chemokine 10

    See identical proteins and their annotated locations for XP_003832346.1

    UniProtKB/TrEMBL
    A0A2R9BLR2
    Related
    ENSPPAP00000030363.1
    Conserved Domains (1) summary
    cd00273
    Location:25 → 89
    Chemokine_CXC; Chemokine_CXC: 1 of 4 subgroup designations based on the arrangement of the two N-terminal cysteine residues; includes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; many members ...
Nucleotide Protein
Heading Accession and Version

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