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ALYREF Aly/REF export factor [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100925707, updated on 8-Mar-2024

Summary

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Gene symbol
ALYREF
Gene description
Aly/REF export factor
See related
Ensembl:ENSSHAG00000031476
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (308182628..308186529, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838856.1 (689031..692801)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase subunit beta Neighboring gene Rho GDP dissociation inhibitor alpha Neighboring gene anaphase promoting complex subunit 11 Neighboring gene neuropeptide B Neighboring gene phosphate cytidylyltransferase 2, ethanolamine

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    308182628..308186529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031965650.1 → XP_031821510.1  THO complex subunit 4

    UniProtKB/TrEMBL
    A0A7N4NYY8
    Related
    ENSSHAP00000030588.1, ENSSHAT00000034337.1
    Conserved Domains (2) summary
    pfam07078
    Location:3 → 19
    FYTT; Forty-two-three protein
    cd12680
    Location:108 → 181
    RRM_THOC4; RNA recognition motif (RRM) found in THO complex subunit 4 (THOC4) and similar proteins
Nucleotide Protein
Heading Accession and Version

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