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LOC100846375 acetyl-CoA carboxylase 2 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100846375, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100846375
Gene description
acetyl-CoA carboxylase 2
Locus tag
BRADI_5g03860v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 5
Exon count:
34
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 5 NC_016135.3 (4904787..4919046)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 5 NC_016135.2 (4904739..4918930)

Chromosome 5 - NC_016135.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100843025 Neighboring gene INO80 complex subunit C Neighboring gene uncharacterized LOC112269237 Neighboring gene 5.8S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-CoA carboxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016135.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    4904787..4919046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003581327.4 → XP_003581375.1  acetyl-CoA carboxylase 2

    UniProtKB/TrEMBL
    I1IWF2
    Conserved Domains (8) summary
    cd06850
    Location:778 → 842
    biotinyl_domain; The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, ...
    COG0439
    Location:139 → 644
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:709 → 842
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    pfam00289
    Location:136 → 255
    CPSase_L_chain; Carbamoyl-phosphate synthase L chain, N-terminal domain
    pfam01039
    Location:1666 → 2219
    Carboxyl_trans; Carboxyl transferase domain
    pfam02785
    Location:531 → 638
    Biotin_carb_C; Biotin carboxylase C-terminal domain
    pfam08326
    Location:843 → 1568
    ACC_central; Acetyl-CoA carboxylase, central region
    cl17255
    Location:260 → 484
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein Strain
Heading Accession and Version

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