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Taxonomy browser (Brachypodium distachyon)

Brachypodium distachyon

Taxonomy ID: 15368 (for references in articles please use NCBI:txid15368)
current name
Brachypodium distachyon (L.) P.Beauv.
Genbank common name: stiff brome
NCBI BLAST name: monocots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
common name(s) annual false brome, false brome, purple false brome
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
   Entrez records   
Database name Direct links
Nucleotide 542,070
Protein 96,480
Structure 3
Genome 1
Popset 132
GEO Datasets 350
PubMed Central 2,907
Gene 36,551
SRA Experiments 4,628
Protein Clusters 16,065
Identical Protein Groups 54,895
Bio Project 2,821
Bio Sample 5,372
Bio Systems 266
Assembly 6
Probe 27,371
Taxonomy 1

Comments and References:

TROPICOS (Nov 12, 2012)
Name verified on 12 November 2012 in: Tropicos.org. Missouri Botanical Garden, 2008 - 4344 Shaw Boulevard, Saint Louis, Missouri 63110, U.S.A. on line at: http://www.tropicos.org/
African Plant Database (Nov 10, 2012)
Name accessed on 10 November 2012 in: African Flowering Plants Database (version 3.1). Conservatoire et Jardin botaniques de la Villle de Geneve and South African National Biodiversity Institute, Pretoria, retrieved from http://www.ville-ge.ch/musinfo/bd/cjb/africa
Catalan P et al. 2012
Catalan P, Mueller J, Hasterok R, Jenkins G, Mur LAJ, Langdon T, Betekhtin T, Siwinska D, Pimentel M and Lopez-Alvarez D. 2012. Evolution and taxonomic split of the model grass Brachypodium distachyon. Annals of Botany (2012) 109(2): 385-405. doi: 10.1093/aob/mcr294 First published online: January 1, 2012
Flora of China - Poaceae
Chen S-L et al. 2006. Poaceae (R. Brown) Barnhart. In Wu, Z. Y., P. H. Raven & D. Y. Hong, eds. Flora of China. Vol. 22 (Poaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. Online at Flora of China: www.efloras.org

Genome Information

Go to NCBI genomic BLAST page for Brachypodium distachyon
Genome view: 6 chromosomes
Names 1 2 3 4 5 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Brachypodium distachyon taxonomy taxonomy/phylogenetic Arctos Specimen Database
Brachypodium distachyon taxonomy/phylogenetic CalPhotos
dryaddb supplemental materials Dryad Digital Repository
Brachypodium distachyon (L.) Beauv. taxonomy/phylogenetic Encyclopedia of life
581 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2614208542: Brachypodium distachyon Bd21-3 organism-specific Integrated Microbial Genomes
Brachypodium distachyon (L.) Beauv. taxonomy/phylogenetic Integrated Taxonomic Information System
Brachypodium distachyon taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Brachypodium distachyon taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
Brachypodium distachyon taxonomy/phylogenetic Plants of the World Online
Brachypodium distachyon taxonomy/phylogenetic The International Plant Names Index
Brachypodium distachyon taxonomy/phylogenetic TreeBase
Brachypodium distachyon (L.) P. Beauv. taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
5 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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