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LOC100845573 dehydrodolichyl diphosphate synthase 6 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100845573, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100845573
Gene description
dehydrodolichyl diphosphate synthase 6
Locus tag
BRADI_1g48240v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (47027263..47029369, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (47107033..47109116, complement)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-4-1 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g56140 Neighboring gene microRNA MIR7734 Neighboring gene RING-H2 finger protein ATL46 Neighboring gene AP-1 complex subunit gamma-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyprenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polyprenol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dehydrodolichyl diphosphate synthase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    47027263..47029369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010229687.3 → XP_010227989.1  dehydrodolichyl diphosphate synthase 6 isoform X2

    UniProtKB/TrEMBL
    A0A2K2DQ87
    Conserved Domains (1) summary
    cd00475
    Location:47 → 283
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases

  2. XM_003564212.3 → XP_003564260.1  dehydrodolichyl diphosphate synthase 6 isoform X1

    UniProtKB/TrEMBL
    I1H0N5
    Conserved Domains (1) summary
    cd00475
    Location:50 → 286
    Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases
Nucleotide Protein Strain
Heading Accession and Version

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