U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100830949 transcription factor MYB20 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100830949, updated on 6-Apr-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100830949
Gene description
transcription factor MYB20
Locus tag
BRADI_3g36370v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (38406039..38407542)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (38708295..38709786)

Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene indole-2-monooxygenase Neighboring gene F-box protein SKIP28 Neighboring gene protein TIFY 6a Neighboring gene uncharacterized LOC104584217

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources. Mochida K, et al. PLoS One, 2013. PMID 24130698, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
transcription factor MYB20

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    38406039..38407542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003572166.4 → XP_003572214.1  transcription factor MYB20

    UniProtKB/TrEMBL
    I1I777
    Conserved Domains (2) summary
    smart00717
    Location:14 → 63
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:14 → 61
    Myb_DNA-binding; Myb-like DNA-binding domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases