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LOC100821631 serine/threonine-protein phosphatase PP1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100821631, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100821631
Gene description
serine/threonine-protein phosphatase PP1
Locus tag
BRADI_3g37570v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100821631 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (39828806..39830425)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (40131076..40132698)

Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104584227 Neighboring gene AAA-ATPase At3g28610 Neighboring gene exocyst complex component EXO70B1 Neighboring gene uncharacterized LOC100822258

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase PP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    39828806..39830425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010236893.3 → XP_010235195.1  serine/threonine-protein phosphatase PP1 isoform X1

    Conserved Domains (2) summary
    smart00156
    Location:28 → 306
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    cd07414
    Location:6 → 306
    MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

  2. XM_003574535.4 → XP_003574583.1  serine/threonine-protein phosphatase PP1 isoform X2

    UniProtKB/TrEMBL
    I1I7M3
    Conserved Domains (2) summary
    smart00156
    Location:28 → 296
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
    cd07414
    Location:6 → 296
    MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain
Nucleotide Protein Strain
Heading Accession and Version

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