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Slc7a2 solute carrier family 7 member 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100772617, updated on 8-Mar-2024

Summary

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Gene symbol
Slc7a2
Gene description
solute carrier family 7 member 2
Locus tag
I79_003178
See related
Ensembl:ENSCGRG00015023682
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Slc7a2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613654.1 (1792603..1811962, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (44896327..44915751, complement)

NW_003613654.1Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor receptor like Neighboring gene cyclin-dependent kinases regulatory subunit 1-like Neighboring gene disintegrin and metalloproteinase domain-containing protein 25-like Neighboring gene disintegrin and metalloproteinase domain-containing protein 25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cationic amino acid transporter 2
Names
Low affinity cationic amino acid transporter 2
solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613654.1 Reference CriGri_1.0 Primary Assembly

    Range
    1792603..1811962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497584.4 → XP_003497632.1  cationic amino acid transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MFU0
    Conserved Domains (2) summary
    TIGR00906
    Location:5 → 607
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:555 → 605
    AA_permease_C; C-terminus of AA_permease

  2. XM_003497583.4 → XP_003497631.1  cationic amino acid transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MCZ5, A0A8C2MFU0
    Conserved Domains (2) summary
    TIGR00906
    Location:5 → 608
    2A0303; cationic amino acid transport permease
    pfam13906
    Location:556 → 606
    AA_permease_C; C-terminus of AA_permease

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    44896327..44915751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035453231.1 → XP_035309122.1  cationic amino acid transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MFU0, A0A9J7HE94
    Related
    ENSCGRP00015031516.2, ENSCGRT00015038507.2
    Conserved Domains (1) summary
    TIGR00906
    Location:5 → 607
    2A0303; cationic amino acid transport permease

  2. XM_035453230.1 → XP_035309121.1  cationic amino acid transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MFU0, A0A9J7HF06
    Related
    ENSCGRP00015031537.2, ENSCGRT00015038529.2
    Conserved Domains (1) summary
    TIGR00906
    Location:5 → 608
    2A0303; cationic amino acid transport permease
Nucleotide Protein Strain
Heading Accession and Version

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