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LOC100768654 retinal dehydrogenase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768654, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100768654
Gene description
retinal dehydrogenase 1
Locus tag
I79_018768
See related
Ensembl:ENSCGRG00015003954
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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See LOC100768654 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614889.1 (388201..429060)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (40514744..40555558, complement)

NW_003614889.1Genomic Context describing neighboring genes Neighboring gene annexin A1 Neighboring gene retinal dehydrogenase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables benzaldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinal dehydrogenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614889.1 Reference CriGri_1.0 Primary Assembly

    Range
    388201..429060
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007651107.4 → XP_007649297.1  retinal dehydrogenase 1

    See identical proteins and their annotated locations for XP_007649297.1

    UniProtKB/TrEMBL
    A0A8C2MGR9, A0A9J7FNL7
    Conserved Domains (1) summary
    cd07141
    Location:12 → 492
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    40514744..40555558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027406543.2 → XP_027262344.1  retinal dehydrogenase 1

    UniProtKB/TrEMBL
    A0A8C2MGR9, A0A9J7FNL7
    Related
    ENSCGRP00015005037.2, ENSCGRT00015006227.2
Nucleotide Protein Strain
Heading Accession and Version

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