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LOC100758961 patr class I histocompatibility antigen, A-126 alpha chain-like [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758961, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100758961
Gene description
patr class I histocompatibility antigen, A-126 alpha chain-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614381.1 (749920..751734, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (229159132..229160946, complement)

NW_003614381.1Genomic Context describing neighboring genes Neighboring gene patr class I histocompatibility antigen, A-126 alpha chain-like Neighboring gene H-2 class I histocompatibility antigen, Q10 alpha chain-like Neighboring gene patr class I histocompatibility antigen, A-2 alpha chain Neighboring gene H-2 class I histocompatibility antigen, Q10 alpha chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide antigen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in antigen processing and presentation of endogenous peptide antigen via MHC class Ib IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell mediated cytotoxicity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patr class I histocompatibility antigen, A-126 alpha chain-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614381.1 Reference CriGri_1.0 Primary Assembly

    Range
    749920..751734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027440065.2 → XP_027295866.1  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X2

    UniProtKB/TrEMBL
    A0A9J7H7E6
    Conserved Domains (1) summary
    cd07698
    Location:11 → 102
    IgC1_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain, alpha3 immunoglobulin domain; member of the C1-set of Ig superfamily (IgSF) domains

  2. XM_035459152.1 → XP_035315043.1  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1

    UniProtKB/TrEMBL
    A0A9J7KCL2
    Conserved Domains (1) summary
    cd07698
    Location:11 → 102
    IgC1_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain, alpha3 immunoglobulin domain; member of the C1-set of Ig superfamily (IgSF) domains

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    229159132..229160946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035450582.1 → XP_035306473.1  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X2

    UniProtKB/TrEMBL
    A0A9J7H7E6
    Conserved Domains (1) summary
    cd07698
    Location:11 → 102
    IgC1_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain, alpha3 immunoglobulin domain; member of the C1-set of Ig superfamily (IgSF) domains

  2. XM_035450581.1 → XP_035306472.1  patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1

    UniProtKB/TrEMBL
    A0A9J7KCL2
    Conserved Domains (1) summary
    cd07698
    Location:11 → 102
    IgC1_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain, alpha3 immunoglobulin domain; member of the C1-set of Ig superfamily (IgSF) domains
Nucleotide Protein Strain
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