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Trmt10a tRNA methyltransferase 10A [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100733117, updated on 3-Apr-2024

Summary

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Gene symbol
Trmt10a
Gene description
tRNA methyltransferase 10A
See related
Ensembl:ENSCPOG00000011431
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947497.1 (1129507..1262977, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176376.1 (1174886..1190635, complement)

NW_026947497.1Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 1-like Neighboring gene alcohol dehydrogenase E chain Neighboring gene IST1 homolog Neighboring gene alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide Neighboring gene chromosome unknown C4orf17 homolog Neighboring gene microsomal triglyceride transfer protein Neighboring gene chromosome unknown C4orf54 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N1-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA methyltransferase 10 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947497.1 Reference mCavPor4.1

    Range
    1129507..1262977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063260537.1 → XP_063116607.1  tRNA methyltransferase 10 homolog A isoform X2

  2. XM_063260541.1 → XP_063116611.1  tRNA methyltransferase 10 homolog A isoform X4

  3. XM_003468036.5 → XP_003468084.1  tRNA methyltransferase 10 homolog A isoform X1

    See identical proteins and their annotated locations for XP_003468084.1

    UniProtKB/TrEMBL
    H0VJ59
    Related
    ENSCPOP00000010276.2
    Conserved Domains (1) summary
    cl00407
    Location:112 → 277
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

  4. XM_063260538.1 → XP_063116608.1  tRNA methyltransferase 10 homolog A isoform X3

  5. XM_013150572.3 → XP_013006026.1  tRNA methyltransferase 10 homolog A isoform X1

    See identical proteins and their annotated locations for XP_013006026.1

    UniProtKB/TrEMBL
    H0VJ59
    Conserved Domains (1) summary
    cl00407
    Location:112 → 277
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

  6. XM_063260540.1 → XP_063116610.1  tRNA methyltransferase 10 homolog A isoform X3

  7. XM_013150571.3 → XP_013006025.1  tRNA methyltransferase 10 homolog A isoform X1

    See identical proteins and their annotated locations for XP_013006025.1

    UniProtKB/TrEMBL
    H0VJ59
    Conserved Domains (1) summary
    cl00407
    Location:112 → 277
    tRNA_m1G_MT; tRNA (Guanine-1)-methyltransferase

  8. XM_063260536.1 → XP_063116606.1  tRNA methyltransferase 10 homolog A isoform X1

    UniProtKB/TrEMBL
    H0VJ59
Nucleotide Protein
Heading Accession and Version

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