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Rnf38 ring finger protein 38 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100731657, updated on 6-Jun-2024

Summary

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Gene symbol
Rnf38
Gene description
ring finger protein 38
See related
Ensembl:ENSCPOG00000023073
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (191756284..191914007)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176392.1 (16770567..16854346, complement)

NW_026947484.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134473989 Neighboring gene maternal embryonic leucine zipper kinase Neighboring gene uncharacterized LOC134473995 Neighboring gene uncharacterized LOC134474004

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF38

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947484.1 Reference mCavPor4.1

    Range
    191756284..191914007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063225339.1 → XP_063081409.1  E3 ubiquitin-protein ligase RNF38 isoform X1

    UniProtKB/TrEMBL
    H0W9S5

  2. XM_063225340.1 → XP_063081410.1  E3 ubiquitin-protein ligase RNF38 isoform X2

    UniProtKB/TrEMBL
    H0W9S5

  3. XM_063225341.1 → XP_063081411.1  E3 ubiquitin-protein ligase RNF38 isoform X3

    UniProtKB/TrEMBL
    H0W9S5

  4. XM_063225347.1 → XP_063081417.1  E3 ubiquitin-protein ligase RNF38 isoform X4

    UniProtKB/TrEMBL
    A0A286XP93

  5. XM_063225385.1 → XP_063081455.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93

  6. XM_013153530.3 → XP_013008984.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    See identical proteins and their annotated locations for XP_013008984.1

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93
    Conserved Domains (1) summary
    cd16472
    Location:377 → 421
    RING-H2_RNF38_like; RING finger, H2 subclass, found in RING finger proteins RNF38, RNF44, and similar proteins

  7. XM_063225356.1 → XP_063081426.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93

  8. XM_063225373.1 → XP_063081443.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93

  9. XM_063225378.1 → XP_063081448.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93

  10. XM_013153531.3 → XP_013008985.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    See identical proteins and their annotated locations for XP_013008985.1

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93
    Conserved Domains (1) summary
    cd16472
    Location:377 → 421
    RING-H2_RNF38_like; RING finger, H2 subclass, found in RING finger proteins RNF38, RNF44, and similar proteins

  11. XM_013153532.3 → XP_013008986.1  E3 ubiquitin-protein ligase RNF38 isoform X5

    See identical proteins and their annotated locations for XP_013008986.1

    UniProtKB/TrEMBL
    A0A286XE37, A0A286XP93
    Related
    ENSCPOP00000023727.1
    Conserved Domains (1) summary
    cd16472
    Location:377 → 421
    RING-H2_RNF38_like; RING finger, H2 subclass, found in RING finger proteins RNF38, RNF44, and similar proteins
Nucleotide Protein
Heading Accession and Version

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