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E2f6 E2F transcription factor 6 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100713523, updated on 8-Mar-2024

Summary

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Gene symbol
E2f6
Gene description
E2F transcription factor 6
See related
Ensembl:ENSCPOG00000019385
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See E2f6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947491.1 (6783023..6794627, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176294.1 (2851955..2863562)

NW_026947491.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 66 member 3 Neighboring gene Rho associated coiled-coil containing protein kinase 2 Neighboring gene growth regulating estrogen receptor binding 1 Neighboring gene lipin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2F6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947491.1 Reference mCavPor4.1

    Range
    6783023..6794627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063254298.1 → XP_063110368.1  transcription factor E2F6 isoform X1

  2. XM_003462692.5 → XP_003462740.2  transcription factor E2F6 isoform X2

    UniProtKB/TrEMBL
    H0W143
    Related
    ENSCPOP00000016681.2
    Conserved Domains (2) summary
    cd14660
    Location:139 → 239
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:65 → 128
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
Nucleotide Protein
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Molecular Biology Databases
Research Materials