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rps25 ribosomal protein S25 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100690179, updated on 8-Mar-2024

Summary

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Gene symbol
rps25
Gene description
ribosomal protein S25
See related
Ensembl:ENSONIG00000005440
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in skin (RPKM 1956.4), kidney (RPKM 1380.2) and 9 other tissues See more
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG14
Exon count:
5
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG14 NC_031979.2 (14953331..14955873, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG14 NC_031979.1 (25565112..25567613)

Linkage Group LG14 - NC_031979.2Genomic Context describing neighboring genes Neighboring gene sacsin molecular chaperone Neighboring gene sarcoglycan, gamma Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene solute carrier family 37 member 4a Neighboring gene uncharacterized LOC109194609

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031979.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    14953331..14955873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003441609.5 → XP_003441657.1  40S ribosomal protein S25

    See identical proteins and their annotated locations for XP_003441657.1

    UniProtKB/TrEMBL
    A0A669E4L2, I3JD93
    Related
    ENSONIP00000067985.1, ENSONIT00000034018.1
    Conserved Domains (1) summary
    pfam03297
    Location:33 → 109
    Ribosomal_S25; S25 ribosomal protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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