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rps25 ribosomal protein S25 [ Danio rerio (zebrafish) ]

Gene ID: 393788, updated on 13-Jun-2020

Summary

Official Symbol
rps25provided by ZNC
Official Full Name
ribosomal protein S25provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1788
See related
Ensembl:ENSDARG00000041811
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:73391
Orthologs

Genomic context

See rps25 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (39125637..39130838, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (39182357..39187558, complement)
103 previous assembly Zv9 (GCF_000002035.4) 10 NC_007121.5 (40466686..40471887, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene si:ch73-1a9.3 Neighboring gene mitochondrial intermediate peptidase b Neighboring gene vicilin-like seed storage protein At2g18540 Neighboring gene solute carrier family 37 member 4b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC73391

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200815.1NP_957109.1  40S ribosomal protein S25

    See identical proteins and their annotated locations for NP_957109.1

    Status: PROVISIONAL

    Source sequence(s)
    BC059695
    UniProtKB/Swiss-Prot
    Q6PBI5
    Related
    ENSDARP00000124711.1, ENSDART00000148648.3
    Conserved Domains (1) summary
    pfam03297
    Location:12111
    Ribosomal_S25; S25 ribosomal protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    39125637..39130838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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