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CCSER1 coiled-coil serine rich protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100683110, updated on 17-Aug-2024

Summary

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Official Symbol
CCSER1provided by VGNC
Official Full Name
coiled-coil serine rich protein 1provided by VGNC
Primary source
VGNC:VGNC:38920
See related
Ensembl:ENSCAFG00845019822
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
FAM190A
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 32
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 32 NC_051836.1 (13515615..14871711)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 32 NC_006614.4 (27247704..28603701, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 32 NC_049253.1 (25235060..26599386, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 32 NC_049292.1 (13492142..14849051)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 32 NC_049773.1 (13313345..14670193)

Chromosome 32 - NC_051836.1Genomic Context describing neighboring genes Neighboring gene multimerin 1 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene small nucleolar RNA SNORD24 Neighboring gene U4 spliceosomal RNA Neighboring gene insulin-degrading enzyme-like Neighboring gene uncharacterized LOC111093611 Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene uncharacterized LOC119867153 Neighboring gene uncharacterized LOC119867186

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
serine-rich coiled-coil domain-containing protein 1
Names
family with sequence similarity 190, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051836.1 Reference ROS_Cfam_1.0

    Range
    13515615..14871711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038444139.1 → XP_038300067.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9
    Related
    ENSCAFP00845027361.1, ENSCAFT00845034937.1

  2. XM_038444141.1 → XP_038300069.1  serine-rich coiled-coil domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PU85, A0A8C0QV55, A0A8C0T475, A0A8I3S1D5
    Related
    ENSCAFP00845027446.1, ENSCAFT00845035056.1

  3. XM_038444142.1 → XP_038300070.1  serine-rich coiled-coil domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0T2V6, A0A8I3PB08, A0A8P0PD86
    Related
    ENSCAFP00845027512.1, ENSCAFT00845035149.1

  4. XM_038444140.1 → XP_038300068.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049292.1 Alternate UMICH_Zoey_3.1

    Range
    13492142..14849051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038518527.1 → XP_038374455.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

  2. XM_038518530.1 → XP_038374458.1  serine-rich coiled-coil domain-containing protein 1 isoform X2

  3. XM_038518531.1 → XP_038374459.1  serine-rich coiled-coil domain-containing protein 1 isoform X3

  4. XM_038518529.1 → XP_038374457.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049773.1 Alternate UNSW_CanFamBas_1.0

    Range
    13313345..14670193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038646473.1 → XP_038502401.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

  2. XM_038646476.1 → XP_038502404.1  serine-rich coiled-coil domain-containing protein 1 isoform X2

  3. XM_038646475.1 → XP_038502403.1  serine-rich coiled-coil domain-containing protein 1 isoform X4

  4. XM_038646477.1 → XP_038502405.1  serine-rich coiled-coil domain-containing protein 1 isoform X3

  5. XM_038646474.1 → XP_038502402.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049253.1 Alternate UU_Cfam_GSD_1.0

    Range
    25235060..26599386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038582134.1 → XP_038438062.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9

  2. XM_038582135.1 → XP_038438063.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9

  3. XM_038582136.1 → XP_038438064.1  serine-rich coiled-coil domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PU85, A0A8C0QV55, A0A8C0T475, A0A8I3S1D5

  4. XM_038582137.1 → XP_038438065.1  serine-rich coiled-coil domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0T2V6, A0A8I3PB08, A0A8P0PD86

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006614.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    27247704..28603701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038462080.1 → XP_038318008.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9

  2. XM_038462081.1 → XP_038318009.1  serine-rich coiled-coil domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0PLM0, A0A8C0T475, A0A8I3S1B9

  3. XM_038462082.1 → XP_038318010.1  serine-rich coiled-coil domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PU85, A0A8C0QV55, A0A8C0T475, A0A8I3S1D5

  4. XM_038462083.1 → XP_038318011.1  serine-rich coiled-coil domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0T2V6, A0A8I3PB08, A0A8P0PD86
Nucleotide Protein
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