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LOC100667419 histone H2B type 1-C/E/F/G/I [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100667419, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100667419
Gene description
histone H2B type 1-C/E/F/G/I
See related
EnsemblRapid:ENSLAFG00000040373
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 1 NC_087342.1 (71515856..71530534)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573464.1 (330149..344945, complement)

Chromosome 1 - NC_087342.1Genomic Context describing neighboring genes Neighboring gene histone H1.4-like Neighboring gene histone H3.1-like Neighboring gene histone H2A type 1 Neighboring gene histone H2B type 1-C/E/F/G/I Neighboring gene histone H2A type 1-B Neighboring gene uncharacterized LOC100666562 Neighboring gene histone H4 Neighboring gene histone H1.3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2B type 1-C/E/F/G/I
Names
histone H2B type 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087342.1 Reference mLoxAfr1.hap2

    Range
    71515856..71530534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010596167.3 → XP_010594469.1  histone H2B type 1-C/E/F/G/I

    See identical proteins and their annotated locations for XP_010594469.1

    UniProtKB/TrEMBL
    G3U5B3, G3UJB0, G3UNK7
    Conserved Domains (1) summary
    smart00427
    Location:28 → 124
    H2B; Histone H2B

  2. XM_003416410.4 → XP_003416458.1  histone H2B type 1-C/E/F/G/I

    See identical proteins and their annotated locations for XP_003416458.1

    UniProtKB/TrEMBL
    G3U5B3, G3UJB0, G3UNK7
    Conserved Domains (1) summary
    smart00427
    Location:28 → 124
    H2B; Histone H2B

  3. XM_023555721.2 → XP_023411489.1  histone H2B type 1-C/E/F/G/I

    UniProtKB/TrEMBL
    G3U5B3, G3UJB0, G3UNK7
    Related
    ENSLAFP00000036056.1, ENSLAFT00000053029.1
    Conserved Domains (1) summary
    smart00427
    Location:28 → 124
    H2B; Histone H2B
Nucleotide Protein
Heading Accession and Version

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