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CTRB2 chymotrypsinogen B2 [ Sus scrofa (pig) ]

Gene ID: 100621642, updated on 8-Mar-2024

Summary

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Gene symbol
CTRB2
Gene description
chymotrypsinogen B2
See related
Ensembl:ENSSSCG00000023127
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Restricted expression toward ovary (RPKM 61.9) See more
Orthologs
human all
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Genomic context

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Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (12420976..12426331)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (12256439..12268562)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene chymotrypsinogen B-like Neighboring gene chymotrypsinogen 2-like Neighboring gene uncharacterized LOC110260914 Neighboring gene ZFP1 zinc finger protein Neighboring gene 60S ribosomal protein L37a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chymotrypsinogen B2
Names
chymotrypsinogen B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    12420976..12426331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003355749.4 → XP_003355797.1  chymotrypsinogen B2

    UniProtKB/TrEMBL
    A0A480M2A7, A0A8D1FLL8, A0A8D1UN26
    Related
    ENSSSCP00000064992.2, ENSSSCT00000082218.2
    Conserved Domains (2) summary
    smart00020
    Location:33 → 256
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:34 → 259
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version

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