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LOC100592562 trypsin-1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100592562, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100592562
Gene description
trypsin-1
See related
EnsemblRapid:ENSNLEG00000030749
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
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Genomic context

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See LOC100592562 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (91732888..91737264)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (94163548..94167953)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene T cell receptor beta variable 18-like Neighboring gene T cell receptor beta constant 2-like Neighboring gene trypsin-2 Neighboring gene serine protease 2 Neighboring gene T cell receptor beta variable 30-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trypsin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    91732888..91737264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003270842.3 → XP_003270890.2  trypsin-1 isoform X1

    UniProtKB/TrEMBL
    G1QQL8

  2. XM_003270841.4 → XP_003270889.2  trypsin-1 isoform X3

    UniProtKB/TrEMBL
    G1QQL8
    Related
    ENSNLEP00000003236.2, ENSNLET00000003398.3
    Conserved Domains (1) summary
    cd00190
    Location:24 → 242
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

  3. XM_004090247.3 → XP_004090295.2  trypsin-1 isoform X2

    UniProtKB/TrEMBL
    G1QQL8
    Conserved Domains (1) summary
    smart00020
    Location:23 → 253
    Tryp_SPc; Trypsin-like serine protease
Nucleotide Protein
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