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ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100549189, updated on 8-Mar-2024

Summary

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Gene symbol
ZCRB1
Gene description
zinc finger CCHC-type and RNA binding motif containing 1
See related
Ensembl:ENSMGAG00000009450
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 1 NC_015011.2 (28840836..28847594, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 1 NC_015011.1 (30461713..30467514, complement)

Chromosome 1 - NC_015011.2Genomic Context describing neighboring genes Neighboring gene glucoside xylosyltransferase 1 Neighboring gene YY1 associated factor 2 Neighboring gene periphilin 1 Neighboring gene prickle planar cell polarity protein 1 Neighboring gene uncharacterized LOC109365929

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCHC-type and RNA-binding motif-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015011.2 Reference Turkey_5.1 Primary Assembly

    Range
    28840836..28847594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003202004.3 → XP_003202052.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_003202052.1

    UniProtKB/TrEMBL
    G1NB07
    Related
    ENSMGAP00000009762.3, ENSMGAT00000010596.3
    Conserved Domains (2) summary
    PTZ00368
    Location:97 → 123
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    cd12393
    Location:9 → 84
    RRM_ZCRB1; RNA recognition motif (RRM) found in Zinc finger CCHC-type and RNA-binding motif-containing protein 1 (ZCRB1) and similar proteins

  2. XM_010707048.3 → XP_010705350.1  zinc finger CCHC-type and RNA-binding motif-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    G1NB07
    Conserved Domains (2) summary
    PTZ00368
    Location:56 → 82
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    cl17169
    Location:1 → 43
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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