U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RBM7 RNA binding motif protein 7 [ Sus scrofa (pig) ]

Gene ID: 100522453, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
RBM7provided by VGNC
Official Full Name
RNA binding motif protein 7provided by VGNC
Primary source
VGNC:VGNC:108612
See related
Ensembl:ENSSSCG00000027905
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in lung (RPKM 10.4), spleen (RPKM 9.8) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (41947081..41955683)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (46923883..46932024, complement)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102168180 Neighboring gene nicotinamide N-methyltransferase Neighboring gene chromosome 9 C11orf71 homolog Neighboring gene uncharacterized LOC110255435 Neighboring gene RNA exonuclease 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RNA-binding protein 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    41947081..41955683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003129877.5 → XP_003129925.1  RNA-binding protein 7

    UniProtKB/TrEMBL
    A0A4X1T1M3, A0A8D0LJT4, A0A8D0UEY9, A0A8D1SW84, F1SJV7
    Related
    ENSSSCP00000028196.1, ENSSSCT00000032163.3
    Conserved Domains (2) summary
    COG0724
    Location:9 → 202
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12592
    Location:9 → 83
    RRM_RBM7; RNA recognition motif in vertebrate RNA-binding protein 7 (RBM7)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous