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VASH1-AS1 VASH1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506603, updated on 11-Jun-2021

Summary

Official Symbol
VASH1-AS1provided by HGNC
Official Full Name
VASH1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:53215
See related
Ensembl:ENSG00000258301
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in lung (RPKM 27.5), spleen (RPKM 26.1) and 25 other tissues See more
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Genomic context

See VASH1-AS1 in Genome Data Viewer
Location:
14q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (76781733..76786724, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (77248076..77253067, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene H1.8 linker histone pseudogene Neighboring gene uncharacterized LOC105370577 Neighboring gene vasohibin 1 Neighboring gene angel homolog 1 Neighboring gene leucine rich repeat containing 74A Neighboring gene ribosomal protein L22 pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Clone Names

  • FLJ43739

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104183.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AF111169
  2. NR_104184.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AK125727, CB047699, DA369488
    Related
    ENST00000556072.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    76781733..76786724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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