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DSCAM-AS1 DSCAM antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 100506492, updated on 11-Jun-2021

Summary

Official Symbol
DSCAM-AS1provided by HGNC
Official Full Name
DSCAM antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40197
See related
Ensembl:ENSG00000235123
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
M41
Expression
Low expression observed in reference dataset See more
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Genomic context

See DSCAM-AS1 in Genome Data Viewer
Location:
21q22.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (40383083..40385358)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (41755010..41757285)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene meiotic recombination hotspot PCP4-2 Neighboring gene Purkinje cell protein 4 Neighboring gene DS cell adhesion molecule Neighboring gene microRNA 4760 Neighboring gene uncharacterized LOC105369294 Neighboring gene DSCAM intronic transcript 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Other Names

  • DSCAM antisense RNA 1 (non-protein coding)

Clone Names

  • AF042090.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038896.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AF401029, AF401033
    Related
    ENST00000427451.5
  2. NR_038898.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has a distinct and shorter internal segment, compared to variant 1.
    Source sequence(s)
    AF401029
    Related
    ENST00000455354.1
  3. NR_038899.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) has a distinct and shorter internal segment, compared to variant 1.
    Source sequence(s)
    AF401029, AF401035
    Related
    ENST00000422749.5
  4. NR_038900.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks an internal exon, compared to variant 1.
    Source sequence(s)
    AF401030
    Related
    ENST00000444046.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    40383083..40385358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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