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c5h6orf58 chromosome 5 C6orf58 homolog [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100496643, updated on 8-Mar-2024

Summary

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Official Symbol
c5h6orf58provided by Xenbase
Official Full Name
chromosome 5 C6orf58 homologprovided by Xenbase
Primary source
Xenbase:XB-GENE-994483
See related
Ensembl:ENSXETG00000032546
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
c6orf58
Orthologs
human all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (68045605..68064852)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (46411602..46430026, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene ethylmalonyl-CoA decarboxylase 1 Neighboring gene KIAA0408 ortholog Neighboring gene MTCL family member 3 Neighboring gene thymocyte selection associated Neighboring gene protein tyrosine phosphatase receptor type K

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein LEG1 homolog
Names
UPF0762 protein C6orf58 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    68045605..68064852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002940391.4 → XP_002940437.3  protein LEG1 homolog

    UniProtKB/TrEMBL
    A0A6I8RW12
    Related
    ENSXETP00000088968.2, ENSXETT00000096914.2
    Conserved Domains (1) summary
    pfam05612
    Location:23 → 331
    Leg1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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