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PARK7 Parkinsonism associated deglycase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100475637, updated on 8-Mar-2024

Summary

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Gene symbol
PARK7
Gene description
Parkinsonism associated deglycase
Locus tag
PANDA_007222
See related
Ensembl:ENSAMEG00000003703
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PARK7 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 11 NC_048228.1 (5574007..5590014)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217568.1 (80392..96413)

Chromosome 11 - NC_048228.1Genomic Context describing neighboring genes Neighboring gene period circadian regulator 3 Neighboring gene TNF receptor superfamily member 9 Neighboring gene uncharacterized LOC117804459 Neighboring gene U6 spliceosomal RNA Neighboring gene ERBB receptor feedback inhibitor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein deglycase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in guanine deglycation, glyoxal removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deglycation, glyoxal removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Parkinson disease protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048228.1 Reference ASM200744v2 Primary Assembly

    Range
    5574007..5590014
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019799075.2 → XP_019654634.1  Parkinson disease protein 7 isoform X1

    UniProtKB/TrEMBL
    D2HA21
    Conserved Domains (1) summary
    TIGR01383
    Location:5 → 184
    not_thiJ; DJ-1 family protein

  2. XM_011224228.3 → XP_011222530.1  Parkinson disease protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A7N5J8L7
    Related
    ENSAMEP00000021654.1, ENSAMET00000050183.1
    Conserved Domains (2) summary
    cd03135
    Location:6 → 152
    GATase1_DJ-1; Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1
    TIGR01383
    Location:5 → 164
    not_thiJ; DJ-1 family protein

  3. XM_002918673.4 → XP_002918719.1  Parkinson disease protein 7 isoform X1

    See identical proteins and their annotated locations for XP_002918719.1

    UniProtKB/TrEMBL
    D2HA21
    Related
    ENSAMEP00000003912.1, ENSAMET00000004070.2
    Conserved Domains (1) summary
    TIGR01383
    Location:5 → 184
    not_thiJ; DJ-1 family protein

  4. XM_019799078.2 → XP_019654637.1  Parkinson disease protein 7 isoform X1

    UniProtKB/TrEMBL
    D2HA21
    Conserved Domains (1) summary
    TIGR01383
    Location:5 → 184
    not_thiJ; DJ-1 family protein

  5. XM_019799077.2 → XP_019654636.1  Parkinson disease protein 7 isoform X1

    UniProtKB/TrEMBL
    D2HA21
    Conserved Domains (1) summary
    TIGR01383
    Location:5 → 184
    not_thiJ; DJ-1 family protein
Nucleotide Protein
Heading Accession and Version

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