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SPRR1B small proline rich protein 1B [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100457514, updated on 26-Mar-2024

Summary

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Gene symbol
SPRR1B
Gene description
small proline rich protein 1B
Locus tag
CR201_G0019000
See related
Ensembl:ENSPPYG00000038816
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See SPRR1B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (97579726..97581438, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (97575306..97577018, complement)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene small proline-rich protein 2A Neighboring gene small proline-rich protein 2D Neighboring gene cornifin-like Neighboring gene small nucleolar RNA SNORA31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
cornifin-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    97579726..97581438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009244046.3 → XP_009242321.1  cornifin-B

    See identical proteins and their annotated locations for XP_009242321.1

    UniProtKB/TrEMBL
    A0A2J8VFI2, A0A8I5T3W0
    Related
    ENSPPYP00000028158.1
    Conserved Domains (1) summary
    pfam02389
    Location:33 → 87
    Cornifin; Cornifin (SPRR) family
Nucleotide Protein
Heading Accession and Version

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