FAM21EP family with sequence similarity 21 member E, pseudogene [Homo sapiens (human)] - Gene

Summary

Official Symbol: FAM21EPprovided by HGNC
Official Full Name: family with sequence similarity 21 member E, pseudogeneprovided by HGNC
Gene description: family with sequence similarity 21, member A pseudogene
Primary source: HGNC:HGNC:45010
See related: Ensembl:ENSG00000290956 AllianceGenome:HGNC:45010
Gene type: pseudo
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression: Ubiquitous expression in heart (RPKM 1.6), thyroid (RPKM 0.8) and 25 other tissues See more
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Genomic context

Location:: 10q11.23

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
110	current	GRCh38.p14 (GCF_000001405.40)	10	NC_000010.11 (50021182..50067803, complement)
110	current	T2T-CHM13v2.0 (GCF_009914755.1)	10	NC_060934.1 (50870826..50917447, complement)
105.20220307	previous assembly	GRCh37.p13 (GCF_000001405.25)	10	NC_000010.10 (51780942..51827563, complement)

Chromosome 10 - NC_000010.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

FAM21B pseudogene
family with sequence similarity 21, member A pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_038275.2 RNA Sequence

Status: VALIDATED

Source sequence(s)

AL442003

Related

ENST00000456967.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

NC_000010.11 Reference GRCh38.p14 Primary Assembly

Range

50021182..50067803 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

NC_060934.1 Alternate T2T-CHM13v2.0

Range

50870826..50917447 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NG_025438.1: Suppressed sequence

Description

NG_025438.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.