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FAM21EP family with sequence similarity 21 member E, pseudogene [ Homo sapiens (human) ]

Gene ID: 100421577, updated on 9-Jun-2025
Official Symbol
FAM21EPprovided by HGNC
Official Full Name
family with sequence similarity 21 member E, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:45010
See related
Ensembl:ENSG00000290956 AllianceGenome:HGNC:45010
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in heart (RPKM 1.6), thyroid (RPKM 0.8) and 25 other tissues See more
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Location:
10q11.23
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (50021182..50067803, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (50870826..50917447, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (51780942..51827563, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene TIMM23B-AGAP6 readthrough (NMD candidate) Neighboring gene RNA, 5S ribosomal pseudogene 317 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 6 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:51784655-51785155 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:51787127-51787626 Neighboring gene solute carrier family 9 member 3 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2365 Neighboring gene WASH complex subunit 2A Neighboring gene solute carrier family 9 member 3 pseudogene 1

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Related articles in PubMed

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Review eQTL and phenotype association data in this region using PheGenI

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Other Names

  • FAM21B pseudogene
  • family with sequence similarity 21, member A pseudogene

Clone Names

  • FLJ31813

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038275.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL442003
    Related
    ENST00000456967.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    50021182..50067803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    50870826..50917447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_025438.1: Suppressed sequence

    Description
    NG_025438.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
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Research Materials