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csrnp2 cysteine-serine-rich nuclear protein 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145289, updated on 17-Aug-2024

Summary

Official Symbol
csrnp2provided by Xenbase
Official Full Name
cysteine-serine-rich nuclear protein 2provided by Xenbase
Primary source
Xenbase:XB-GENE-983697
See related
Ensembl:ENSXETG00000009634
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
fam130a1
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See csrnp2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (142146405..142177141, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (138913047..138943775, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 11 member 2 Neighboring gene LETM1 domain containing 1 Neighboring gene transcription factor CP2 Neighboring gene POU class 6 homeobox 1 Neighboring gene DAZ associated protein 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
involved_in positive regulation of synapse assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in synaptic vesicle clustering IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in excitatory synapse IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
is_active_in postsynaptic density membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in synaptic vesicle membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
cysteine/serine-rich nuclear protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126767.1NP_001120239.1  cysteine/serine-rich nuclear protein 2

    See identical proteins and their annotated locations for NP_001120239.1

    Status: PROVISIONAL

    Source sequence(s)
    BC160429
    UniProtKB/TrEMBL
    A0A803KHY3, B1H112, F7AMQ4
    Related
    ENSXETP00000021220.4, ENSXETT00000021220.4
    Conserved Domains (1) summary
    pfam16019
    Location:66281
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    142146405..142177141 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)