U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SKIC2 SKI2 subunit of superkiller complex [ Bos taurus (domestic cattle) ]

Gene ID: 100139548, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SKIC2provided by VGNC
Official Full Name
SKI2 subunit of superkiller complexprovided by VGNC
Primary source
VGNC:VGNC:107293
See related
Ensembl:ENSBTAG00000005587
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
SKIV2L
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 23
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (27399243..27409300, complement)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 21 subfamily A member 1, pseudogene Neighboring gene complement component 4A Neighboring gene serine/threonine kinase 19 Neighboring gene decapping exoribonuclease Neighboring gene negative elongation factor complex member E Neighboring gene complement factor B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ski complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
superkiller complex protein 2
Names
Ski2 like RNA helicase
helicase SKI2W
superkiller viralicidic activity 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    27399243..27409300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003587695.6 → XP_003587743.1  superkiller complex protein 2

    See identical proteins and their annotated locations for XP_003587743.1

    UniProtKB/TrEMBL
    A0AAA9SE27
    Related
    ENSBTAP00000007339.6, ENSBTAT00000007339.7
    Conserved Domains (5) summary
    smart00490
    Location:626 → 708
    HELICc; helicase superfamily c-terminal domain
    COG4581
    Location:291 → 1244
    Dob10; Superfamily II RNA helicase [Replication, recombination and repair]
    pfam00270
    Location:315 → 462
    DEAD; DEAD/DEAH box helicase
    pfam08148
    Location:1072 → 1238
    DSHCT; DSHCT (NUC185) domain
    pfam13234
    Location:765 → 1042
    rRNA_proc-arch; rRNA-processing arch domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.