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TRIM60P13 tripartite motif containing 60 pseudogene 13 [ Homo sapiens (human) ]

Gene ID: 100132195, updated on 17-Sep-2024

Summary

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Official Symbol
TRIM60P13provided by HGNC
Official Full Name
tripartite motif containing 60 pseudogene 13provided by HGNC
Primary source
HGNC:HGNC:38485
See related
AllianceGenome:HGNC:38485
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See TRIM60P13 in Genome Data Viewer
Location:
13q31.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (89248860..89250671, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (88452918..88454729, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (89901114..89902925, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370307 Neighboring gene long intergenic non-protein coding RNA 1047 Neighboring gene NANOG hESC enhancer GRCh37_chr13:89895215-89895716 Neighboring gene long intergenic non-protein coding RNA 440 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:89976834-89977393 Neighboring gene NANOG hESC enhancer GRCh37_chr13:90016648-90017149 Neighboring gene NANOG hESC enhancer GRCh37_chr13:90032206-90032789 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:90053092-90054291 Neighboring gene uncharacterized LOC107984621 Neighboring gene NANOG hESC enhancer GRCh37_chr13:90058380-90058922 Neighboring gene Sp3 transcription factor pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022984.1 

    Range
    101..1912
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    89248860..89250671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    88452918..88454729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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