Format

Send to:

Choose Destination

SMIM6 small integral membrane protein 6 [ Homo sapiens (human) ]

Gene ID: 100130933, updated on 21-Dec-2019

Summary

Official Symbol
SMIM6provided by HGNC
Official Full Name
small integral membrane protein 6provided by HGNC
Primary source
HGNC:HGNC:40032
See related
Ensembl:ENSG00000259120
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ELN; C17orf110
Expression
Biased expression in stomach (RPKM 5.0), testis (RPKM 3.1) and 8 other tissues See more
Orthologs

Genomic context

See SMIM6 in Genome Data Viewer
Location:
17q25.1
Exon count:
2
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (75646251..75647974)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (73642274..73644057)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene myosin XVB Neighboring gene RecQ like helicase 5 Neighboring gene small integral membrane protein 5 Neighboring gene HNF1 motif-containing MPRA enhancer 181 Neighboring gene uncharacterized LOC107985013 Neighboring gene SAP30 binding protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ27513

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small integral membrane protein 6
Names
endoregulin

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001162997.2NP_001156469.1  small integral membrane protein 6

    See identical proteins and their annotated locations for NP_001156469.1

    Status: VALIDATED

    Source sequence(s)
    AC087749, AI167865, AL041162, BC062771
    Consensus CDS
    CCDS54166.1
    UniProtKB/Swiss-Prot
    P0DI80
    Related
    ENSP00000463361.1, ENST00000579469.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    75646251..75647974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center