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rcan3 RCAN family member 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100124707, updated on 17-Aug-2024

Summary

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Official Symbol
rcan3provided by Xenbase
Official Full Name
RCAN family member 3provided by Xenbase
Primary source
Xenbase:XB-GENE-993945
See related
Ensembl:ENSXETG00000039608
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
rcn3; hrcn3; mcip3; dscr1l2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (90091868..90109100, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (85969148..85985926, complement)

Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel 4 Neighboring gene non-compact myelin associated protein Neighboring gene ring finger protein 19B Neighboring gene transmembrane protein 54 Neighboring gene hippocalcin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC145788

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within calcium-mediated signaling IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
calcipressin-3
Names
regulator of calcineurin 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102693.1 → NP_001096163.1  calcipressin-3

    See identical proteins and their annotated locations for NP_001096163.1

    Status: PROVISIONAL

    Source sequence(s)
    BC146616
    UniProtKB/TrEMBL
    A6H8H9, F7A6A6
    Related
    ENSXETP00000100525.1, ENSXETT00000078523.2
    Conserved Domains (1) summary
    pfam04847
    Location:60 → 227
    Calcipressin

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    90091868..90109100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031895586.1 → XP_031751446.1  calcipressin-3 isoform X1

    UniProtKB/TrEMBL
    A0A803J558
    Related
    ENSXETP00000102987.1, ENSXETT00000120890.1
    Conserved Domains (1) summary
    cl17169
    Location:60 → 182
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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