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ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100091913, updated on 8-Mar-2024

Summary

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Gene symbol
ADAMTS1
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Also known as
ADAMTS5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 17 NC_041744.1 (17957193..17999350)

Chromosome 17 - NC_041744.1Genomic Context describing neighboring genes Neighboring gene listerin E3 ubiquitin protein ligase 1 Neighboring gene N-6 adenine-specific DNA methyltransferase 1 Neighboring gene cysteine and tyrosine rich 1 Neighboring gene amyloid beta precursor protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041744.1 Chromosome 17 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 1
Names
ADAM metallopeptidase with thrombospondin type 1 motif 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041744.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    17957193..17999350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039914551.1 → XP_039770485.1  A disintegrin and metalloproteinase with thrombospondin motifs 1

    Conserved Domains (4) summary
    smart00209
    Location:303 → 355
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:900 → 1107
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:1369 → 1487
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:1120 → 1191
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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