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PSMD10 proteasome 26S subunit, non-ATPase 10 [ Equus caballus (horse) ]

Gene ID: 100054590, updated on 8-Mar-2024

Summary

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Official Symbol
PSMD10provided by VGNC
Official Full Name
proteasome 26S subunit, non-ATPase 10provided by VGNC
Primary source
VGNC:VGNC:21956
See related
Ensembl:ENSECAG00000020803
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PSMD10 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (89493867..89500811, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) X NC_009175.2 (85446885..85453731, complement)

Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 12 Neighboring gene testis expressed 13B Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene autophagy related 4A cysteine peptidase Neighboring gene collagen type IV alpha 6 chain Neighboring gene collagen type IV alpha 5 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 10
Names
26S proteasome non-ATPase regulatory subunit 10-like protein
proteasome (prosome, macropain) 26S subunit, non-ATPase, 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009175.3 Reference EquCab3.0 Primary Assembly

    Range
    89493867..89500811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005614402.3 → XP_005614459.1  26S proteasome non-ATPase regulatory subunit 10 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2KR07
    Conserved Domains (4) summary
    cd00204
    Location:36 → 170
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:44 → 147
    Ank_2; Ankyrin repeats (3 copies)
    pfam13857
    Location:135 → 190
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:39 → 70
    ANK; ANK repeat [structural motif]

  2. XM_003365836.4 → XP_003365884.1  26S proteasome non-ATPase regulatory subunit 10 isoform X1

    UniProtKB/TrEMBL
    F6V2T7
    Related
    ENSECAP00000018360.2, ENSECAT00000022230.4
    Conserved Domains (4) summary
    cd00204
    Location:36 → 159
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:44 → 136
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:13 → 60
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:39 → 70
    ANK; ANK repeat [structural motif]

  3. XM_001490805.5 → XP_001490855.1  26S proteasome non-ATPase regulatory subunit 10 isoform X3

    Conserved Domains (4) summary
    cd00204
    Location:36 → 150
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:44 → 136
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:13 → 60
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:39 → 70
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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